Use the scrambler tool to randomly shuffle peptide or protein sequences.Ĭopyright © 2012-2023 . Compute pI/Mw is a tool which allows the computation of the theoretical pI (isoelectric point) and Mw (molecular weight) for a list of Swiss-Prot and/or TrEMBL. This function calculates the molecular weight of a protein sequence. Try the sequence splitter tool for fragmenting sequences of proteins and peptides with optional overlap. Peptide with Phosphoserine: Arg-Arg-Ala-Ser(PO3)-Pro-Val-Ala Also on this site Pepstats calculates statistics for your protein such as molecular weight, isoelectric point etc. Peptide with isotopically labeled Valine and Isoleucine: Peptide with disulfide bridge (1-6), capped at C-terminal (amide): Cyclic CYFQNCPRG-NH2 Peptide with Biotin on N-terminal: Biotin-YGRKKRRQRRR This function calculates the molecular weight of a protein sequence. Peptide with two disulfide bridges: ACDCRGDCFCG ResearchGate WebYou can calculate a therotical pI and Mw from ExPASy software. Head-to-tail cyclic peptide: cyclo(GRGDSP) Linear peptide in three-letter code: Arg-Gly-Asp-Cys Linear peptide in one-letter code: KYICNSSCM to Protein Primary structure Analysis WebCompute pI/Mw Compute the. Please note: this is a rapidly changing project in development look, feel, and functionality may and will change. 2021 The theoretical pI/Mw of Omicron N and M proteins are 10.09/45340.48 and. It also supports mass calculation of proteins with predefined or custom stable isotope mass labels. It is calculated as the sum of the mass of each amino acid using the scale available on Compute pI/Mw tool. Take a look at the following posts for demonstration of what the calculator is capable of:įor a quick sample of the output screen, you can load a random peptide from the list of peptides the analytical tool has calculated before. This function calculates the molecular weight of a protein sequence. The peptide molecular weight calculator will display average and monoisotopic mass of the molecule, as well as a table of mass divided by charge values, both in positive and negative scan modes, which is useful for mass spec analysis. Simply type in, or copy and paste, peptide or protein fragment amino-acid sequence, including modifications, spacers, or special termini, and press the “Calculate” button. When I calculate the molecular weight of Bovine serum albumin (BSA) with PDB id 3V03 using FASTA sequence, I get a molecular weight of 133kDa with two protein sequences. Type or paste the sequence of a peptide and click Analyze. Sequence How to use this peptide analytical tool
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